Ravi Sachidanandam: search on Z-Library

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1

Application of RNA-Seq transcriptome analysis: CD151 is an Invasion/Migration target in all stages of epithelial ovarian cancer

Rebecca A Mosig, Li Lin, Emir Senturk, Hardik Shah, Fei Huang, Peter Schlosshauer, Samantha Cohen, Robert Fruscio, Sergio Marchini, Maurizio D’Incalci, Ravi Sachidanandam, Peter Dottino, John A Martig

Journal:

Journal of Ovarian Research

Year:

2012

Language:

english

File:

PDF, 646 KB

english, 2012

2

Orientational ordering of icosahedra in solid

Harris, A. B., Sachidanandam, Ravi

Journal:

Physical Review B

Year:

1992

Language:

english

File:

PDF, 593 KB

english, 1992

3

RNA Clamping by Vasa Assembles a piRNA Amplifier Complex on Transposon Transcripts

Xiol, Jordi, Spinelli, Pietro, Laussmann, Maike A., Homolka, David, Yang, Zhaolin, Cora, Elisa, Couté, Yohann, Conn, Simon, Kadlec, Jan, Sachidanandam, Ravi, Kaksonen, Marko, Cusack, Stephen, Ephrussi

Journal:

Year:

2014

Language:

english

File:

PDF, 4.04 MB

english, 2014

4

A germline-specific class of small RNAs binds mammalian Piwi proteins

Girard, Angélique, Sachidanandam, Ravi, Hannon, Gregory J., Carmell, Michelle A.

Journal:

Year:

2006

Language:

english

File:

PDF, 524 KB

english, 2006

5

Unperturbed expression bias of imprinted genes in schizophrenia

Gulyás-Kovács, Attila, Keydar, Ifat, Xia, Eva, Fromer, Menachem, Hoffman, Gabriel, Ruderfer, Douglas, Sachidanandam, Ravi, Chess, Andrew

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 1.27 MB

english, 2018

6

Mean-field theory for

Sachidanandam, Ravi, Harris, A. B.

Journal:

Physical Review B

Year:

1994

Language:

english

File:

PDF, 192 KB

english, 1994

7

Genome wide ChIP-chip analyses reveal important roles for CTCF in Drosophila genome organization

Sheryl T. Smith, Priyankara Wickramasinghe, Andrew Olson, Dmitri Loukinov, Lan Lin, Joy Deng, Yanping Xiong, John Rux, Ravi Sachidanandam, Hao Sun, Victor Lobanenkov, Jumin Zhou

Journal:

Developmental Biology

Year:

2009

Language:

english

File:

PDF, 692 KB

english, 2009

8

Lightweight genome viewer: portable software for browsing genomics data in its chromosomal context

Jeremiah J Faith, Andrew J Olson, Timothy S Gardner, Ravi Sachidanandam

Journal:

BMC Bioinformatics

Year:

2007

Language:

english

File:

PDF, 493 KB

english, 2007

9

Multifaceted roles of miR-1s in repressing the fetal gene program in the heart

Wei, Yusheng, Peng, Siwu, Wu, Meng, Sachidanandam, Ravi, Tu, Zhidong, Zhang, Shihong, Falce, Christine, Sobie, Eric A, Lebeche, Djamel, Zhao, Yong

Journal:

Year:

2014

Language:

english

File:

PDF, 1.63 MB

english, 2014

10

PIWI Slicing and RNA Elements in Precursors Instruct Directional Primary piRNA Biogenesis

Homolka, David, Pandey, Radha Raman, Goriaux, Coline, Brasset, Emilie, Vaury, Chantal, Sachidanandam, Ravi, Fauvarque, Marie-Odile, Pillai, Ramesh S.

Journal:

Year:

2015

Language:

english

File:

PDF, 2.27 MB

english, 2015

11

A 3.9-Centimorgan-Resolution Human Single-Nucleotide Polymorphism Linkage Map and Screening Set

Tara C. Matise, Ravi Sachidanandam, Andrew G. Clark, Leonid Kruglyak, Ellen Wijsman, Jerzy Kakol, Steven Buyske, Buena Chui, Patrick Cohen, Claudia de Toma, Margaret Ehm, Stephen Glanowski, Chunsheng

Journal:

The American Journal of Human Genetics

Year:

2003

Language:

english

File:

PDF, 723 KB

english, 2003

12

The exon junction complex controls transposable element activity by ensuring faithful splicing of the piwi transcript

Malone, Colin D., Mestdagh, Claire, Akhtar, Junaid, Kreim, Nastasja, Deinhard, Pia, Sachidanandam, Ravi, Treisman, Jessica, Roignant, Jean-Yves

Journal:

Genes & Development

Year:

2014

Language:

english

File:

PDF, 2.72 MB

english, 2014

13

Discrete Small RNA-Generating Loci as Master Regulators of Transposon Activity in Drosophila

Julius Brennecke, Alexei A. Aravin, Alexander Stark, Monica Dus, Manolis Kellis, Ravi Sachidanandam, Gregory J. Hannon

Journal:

Year:

2007

Language:

english

File:

PDF, 1.73 MB

english, 2007

14

Specialized piRNA Pathways Act in Germline and Somatic Tissues of the Drosophila Ovary

Colin D. Malone, Julius Brennecke, Monica Dus, Alexander Stark, W. Richard McCombie, Ravi Sachidanandam, Gregory J. Hannon

Journal:

Year:

2009

Language:

english

File:

PDF, 3.64 MB

english, 2009

15

GObar: A Gene Ontology based analysis and visualization tool for gene sets

Jason SM Lee, Gurpreet Katari, Ravi Sachidanandam

Journal:

BMC Bioinformatics

Year:

2005

Language:

english

File:

PDF, 770 KB

english, 2005

16

A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms

Sachidanandam, Ravi, Weissman, David, Schmidt, Steven C., Kakol, Jerzy M., Stein, Lincoln D., Marth, Gabor, Sherry, Steve, Mullikin, James C., Mortimore, Beverley J., Willey, David L.

Journal:

Year:

2001

Language:

english

File:

PDF, 241 KB

english, 2001

17

Post-transcriptional processing generates a diversity of 5′-modified long and short RNAs

Fejes-Toth, Katalin, Sotirova, Vihra, Sachidanandam, Ravi, Assaf, Gordon, Hannon, Gregory J., Kapranov, Philipp, Foissac, Sylvain, Willingham, Aarron T., Duttagupta, Radha, Dumais, Erica

Journal:

Year:

2009

Language:

english

File:

PDF, 455 KB

english, 2009

18

MIWI2 and MILI Have Differential Effects on piRNA Biogenesis and DNA Methylation

Manakov, Sergei A., Pezic, Dubravka, Marinov, Georgi K., Pastor, William A., Sachidanandam, Ravi, Aravin, Alexei A.

Journal:

Year:

2015

Language:

english

File:

PDF, 1.39 MB

english, 2015

19

Deficiency in Glutamine but Not Glucose Induces MYC-Dependent Apoptosis in Human Cells

Mariia Yuneva, Nicola Zamboni, Peter Oefner, Ravi Sachidanandam and Yuri Lazebnik

Journal:

The Journal of Cell Biology

Year:

2007

Language:

english

File:

PDF, 2.66 MB

english, 2007

20

Mouse MOV10L1 associates with Piwi proteins and is an essential component of the Piwi-interacting RNA (piRNA) pathway

Ke Zheng, Jordi Xiol, Michael Reuter, Sigrid Eckardt, N. Adrian Leu, K. John McLaughlin, Alexander Stark, Ravi Sachidanandam, Ramesh S. Pillai, Peijing Jeremy Wang and Brigid L. M. Hogan

Journal:

Proceedings of the National Academy of Sciences

Year:

2010

Language:

english

File:

PDF, 1.48 MB

english, 2010

21

Effect of axial length on full-field and multifocal electroretinograms

Sachidanandam, Ramya, Ravi, Priya, Sen, Parveen

Journal:

Clinical and Experimental Optometry

Year:

2017

Language:

english

File:

PDF, 962 KB

english, 2017

22

Kismeth: Analyzer of plant methylation states through bisulfite sequencing

Eyal Gruntman, Yijun Qi, R Keith Slotkin, Ted Roeder, Robert A Martienssen, Ravi Sachidanandam

Journal:

BMC Bioinformatics

Year:

2008

Language:

english

File:

PDF, 2.83 MB

english, 2008

23

A piRNA Pathway Primed by Individual Transposons Is Linked to De Novo DNA Methylation in Mice

Alexei A. Aravin, Ravi Sachidanandam, Deborah Bourc'his, Christopher Schaefer, Dubravka Pezic, Katalin Fejes Toth, Timothy Bestor, Gregory J. Hannon

Journal:

Year:

2008

Language:

english

File:

PDF, 2.09 MB

english, 2008

24

The Cochaperone Shutdown Defines a Group of Biogenesis Factors Essential for All piRNA Populations in Drosophila

Olivieri, Daniel, Senti, Kirsten-André, Subramanian, Sailakshmi, Sachidanandam, Ravi, Brennecke, Julius

Journal:

Year:

2012

Language:

english

File:

PDF, 13.18 MB

english, 2012

25

Transgenerationally inherited piRNAs trigger piRNA biogenesis by changing the chromatin of piRNA clusters and inducing precursor processing

Le Thomas, Adrien, Stuwe, Evelyn, Li, Sisi, Du, Jiamu, Marinov, Georgi, Rozhkov, Nikolay, Chen, Yung-Chia Ariel, Luo, Yicheng, Sachidanandam, Ravi, Toth, Katalin Fejes, Patel, Dinshaw, Aravin, Alexei

Journal:

Genes & Development

Year:

2014

Language:

english

File:

PDF, 1.47 MB

english, 2014

26

Innate Immune Responses of Bat and Human Cells to Filoviruses: Commonalities and Distinctions

Kuzmin, Ivan V., Schwarz, Toni M., Ilinykh, Philipp A., Jordan, Ingo, Ksiazek, Thomas G., Sachidanandam, Ravi, Basler, Christopher F., Bukreyev, Alexander, Lyles, Douglas S.

Journal:

Journal of Virology

Year:

2017

Language:

english

File:

PDF, 7.43 MB

english, 2017

27

From Silencing to Gene Expression: Real-Time Analysis in Single Cells

Susan M Janicki, Toshiro Tsukamoto, Simone E Salghetti, William P Tansey, Ravi Sachidanandam, Kannanganattu V Prasanth, Thomas Ried, Yaron Shav-Tal, Edouard Bertrand, Robert H Singer, David L Spector

Journal:

Year:

2004

Language:

english

File:

PDF, 612 KB

english, 2004

28

CuO

Sachidanandam, Ravi, Aharony, Amnon

Journal:

Physical Review B

Year:

1997

Language:

english

File:

PDF, 56 KB

english, 1997

29

Activating Transcription Factor 6 Is Necessary and Sufficient for Alcoholic Fatty Liver Disease in Zebrafish

Howarth, Deanna L., Lindtner, Claudia, Vacaru, Ana M., Sachidanandam, Ravi, Tsedensodnom, Orkhontuya, Vasilkova, Taisa, Buettner, Christoph, Sadler, Kirsten C., Mullins, Mary C.

Journal:

Year:

2014

Language:

english

File:

PDF, 983 KB

english, 2014

30

A TLR and Non-TLR Mediated Innate Response to Lentiviruses Restricts Hepatocyte Entry and Can be Ameliorated by Pharmacological Blockade

Agudo, Judith, Ruzo, Albert, Kitur, Kipyegon, Sachidanandam, Ravi, Blander, J Magarian, Brown, Brian D

Journal:

Molecular Therapy

Year:

2012

Language:

english

File:

PDF, 2.92 MB

english, 2012

31

Global effects of the CSR-1 RNA interference pathway on the transcriptional landscape

Cecere, Germano, Hoersch, Sebastian, O'Keeffe, Sean, Sachidanandam, Ravi, Grishok, Alla

Journal:

Nature Structural and Molecular Biology

Year:

2014

Language:

english

File:

PDF, 1.06 MB

english, 2014

32

SHP2 Drives Adaptive Resistance to ERK Signaling Inhibition in Molecularly Defined Subsets of ERK-Dependent Tumors

Ahmed, Tamer A., Adamopoulos, Christos, Karoulia, Zoi, Wu, Xuewei, Sachidanandam, Ravi, Aaronson, Stuart A., Poulikakos, Poulikos I.

Journal:

Year:

2019

Language:

english

File:

PDF, 6.46 MB

english, 2019

33

High-throughput assessment of microRNA activity and function using microRNA sensor and decoy libraries

Mullokandov, Gavriel, Baccarini, Alessia, Ruzo, Albert, Jayaprakash, Anitha D, Tung, Navpreet, Israelow, Benjamin, Evans, Matthew J, Sachidanandam, Ravi, Brown, Brian D

Journal:

Year:

2012

Language:

english

File:

PDF, 1.04 MB

english, 2012

34

70. Knocking Down the Circular RNA ciRS-E2 Blocks Cancer Cell Proliferation Demonstrating Circular RNAs as a New Therapeutic Target

Baccarini, Alessia B., Sachidanandam, Ravi, Brown, Brian

Journal:

Molecular Therapy

Year:

2016

Language:

english

File:

PDF, 313 KB

english, 2016

35

Regulation of m 6 A Transcripts by the 3ʹ→5ʹ RNA Helicase YTHDC2 Is Essential for a Successful Meiotic Program in the Mammalian Germline

Wojtas, Magdalena Natalia, Pandey, Radha Raman, Mendel, Mateusz, Homolka, David, Sachidanandam, Ravi, Pillai, Ramesh S.

Journal:

Year:

2017

Language:

english

File:

PDF, 7.28 MB

english, 2017

36

MPI depletion enhances O-GlcNAcylation of p53 and suppresses the Warburg effect

Shtraizent, Nataly, DeRossi, Charles, Nayar, Shikha, Sachidanandam, Ravi, Katz, Liora S, Prince, Adam, Koh, Anna P, Vincek, Adam, Hadas, Yoav, Hoshida, Yujin, Scott, Donald K, Eliyahu, Efrat, Freeze,

Journal:

Year:

2017

Language:

english

File:

PDF, 3.29 MB

english, 2017

37

A systematic analysis of Drosophila TUDOR domain-containing proteins identifies Vreteno and the Tdrd12 family as essential primary piRNA pathway factors

Handler, Dominik, Olivieri, Daniel, Novatchkova, Maria, Gruber, Franz Sebastian, Meixner, Katharina, Mechtler, Karl, Stark, Alexander, Sachidanandam, Ravi, Brennecke, Julius

Journal:

The EMBO Journal

Year:

2011

Language:

english

File:

PDF, 2.63 MB

english, 2011

38

Regulatory RNomics and Gene Expression

Ghosh, Zhumur, Mallick, Bibekanand, Gautheret, Daniel, Malhotra, Pawan, Sachidanandam, Ravi

Journal:

Journal of Biomedicine and Biotechnology

Year:

2009

Language:

english

File:

PDF, 39 KB

english, 2009

39

Short/branched-chain acyl-CoA dehydrogenase deficiency due to an IVS3+3A>G mutation that causes exon skipping

Pia Pinholt Madsen, Maria Kibæk, Xavier Roca, Ravi Sachidanandam, Adrian R. Krainer, Ernst Christensen, Robert D. Steiner, K. Michael Gibson, Thomas J. Corydon, Inga Knudsen, Ronald J.A. Wanders, Jos

Journal:

Year:

2006

Language:

english

File:

PDF, 345 KB

english, 2006

40

An in vivo RNAi assay identifies major genetic and cellular requirements for primary piRNA biogenesis in Drosophila

Olivieri, Daniel, Sykora, Martina M, Sachidanandam, Ravi, Mechtler, Karl, Brennecke, Julius

Journal:

The EMBO Journal

Year:

2010

Language:

english

File:

PDF, 3.43 MB

english, 2010

41

Preference of RIG-I for short viral RNA molecules in infected cells revealed by next-generation sequencing

Alina Baum, Ravi Sachidanandam and Adolfo García-Sastre

Journal:

Proceedings of the National Academy of Sciences

Year:

2010

Language:

english

File:

PDF, 1.73 MB

english, 2010

42

Deep sequencing of mRNA in CD24− and CD24+ mammary carcinoma Mvt1 cell line

Rostoker, Ran, Jayaprakash, Anitha D., Sachidanandam, Ravi, LeRoith, Derek

Journal:

Year:

2015

Language:

english

File:

PDF, 471 KB

english, 2015

43

piRNA Production Requires Heterochromatin Formation in Drosophila

Prashanth Rangan, Colin D. Malone, Caryn Navarro, Sam P. Newbold, Patrick S. Hayes, Ravi Sachidanandam, Gregory J. Hannon, Ruth Lehmann

Journal:

Current Biology

Year:

2011

Language:

english

File:

PDF, 1.74 MB

english, 2011

44

An In Vivo RNAi Screening Approach to Identify Host Determinants of Virus Replication

Varble, Andrew, Benitez, Asiel A., Schmid, Sonja, Sachs, David, Shim, Jaehee V., Rodriguez-Barrueco, Ruth, Panis, Maryline, Crumiller, Marshall, Silva, Jose M., Sachidanandam, Ravi, tenOever, Benjamin

Journal:

Cell Host & Microbe

Year:

2013

Language:

english

File:

PDF, 1.62 MB

english, 2013

45

Bacterial Argonaute Samples the Transcriptome to Identify Foreign DNA

Olovnikov, Ivan, Chan, Ken, Sachidanandam, Ravi, Newman, Dianne K., Aravin, Alexei A.

Journal:

Year:

2013

Language:

english

File:

PDF, 972 KB

english, 2013

46

mRNA-Seq Reveals Novel Molecular Mechanisms and a Robust Fingerprint in Graves' Disease

Yin, Xiaoming, Sachidanandam, Ravi, Morshed, Syed, Latif, Rauf, Shi, Ruijin, Davies, Terry F.

Journal:

Journal of Clinical Endocrinology & Metabolism

Year:

2014

Language:

english

File:

PDF, 2.10 MB

english, 2014

47

An endogenous small interfering RNA pathway in Drosophila

Czech, Benjamin, Malone, Colin D., Zhou, Rui, Stark, Alexander, Schlingeheyde, Catherine, Dus, Monica, Perrimon, Norbert, Kellis, Manolis, Wohlschlegel, James A., Sachidanandam, Ravi

Journal:

Year:

2008

Language:

english

File:

PDF, 566 KB

english, 2008

48

=Nd, Pr, and Sm)

Sachidanandam, Ravi, Yildirim, T., Harris, A. B., Aharony, Amnon, Entin-Wohlman, O.

Journal:

Physical Review B

Year:

1997

Language:

english

File:

PDF, 580 KB

english, 1997

49

PIWI Slicing and EXD1 Drive Biogenesis of Nuclear piRNAs from Cytosolic Targets of the Mouse piRNA Pathway

Yang, Zhaolin, Chen, Kuan-Ming, Pandey, Radha Raman, Homolka, David, Reuter, Michael, Janeiro, Bruno Kotska Rodino, Sachidanandam, Ravi, Fauvarque, Marie-Odile, McCarthy, Andrew A., Pillai, Ramesh S.

Journal:

Year:

2015

Language:

english

File:

PDF, 3.93 MB

english, 2015

50

Distinct Roles of RNA Helicases MVH and TDRD9 in PIWI Slicing-Triggered Mammalian piRNA Biogenesis and Function

Wenda, Joanna M., Homolka, David, Yang, Zhaolin, Spinelli, Pietro, Sachidanandam, Ravi, Pandey, Radha Raman, Pillai, Ramesh S.

Journal:

Developmental Cell

Year:

2017

Language:

english

File:

PDF, 4.81 MB

english, 2017

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